LAMARC

LAMARC (Likelihood Analysis with Metropolis Algorithm using Random Coalescence; Beerli 2006).

Documentation: 

Online documentation is available from the LAMARC web site.

Meaning of the g parameter in LAMARC

Pluzhnikov & Donnelly (1996) describe the relationship between sample size and genetic variation when making experimental design decisions.

Input Format: 

LAMARC requires infiles to be in XML format; however, the Lam_Conv utility will convert PHYLIP files into XML.

Example data files:

* Example DNA sequence data set (view, download)
* Example enzyme electrophoresis data set (view, download)
* Example microsatellite data set (view, download)

Instructions for All: 

Instructions

To convert PHYLIP files into XML use the converter. In the terminal window type:

lam_conv

To run LAMARC locally, type the program name at a terminal window prompt:

lamarc